1.Kumar K, Rao KP, Sharma P, Sinha AK: Differential regulation of rice mitogen activated protein kinase kinase (MKK) by abiotic stress. Plant physiology and biochemistry: PPB / Societe francaise de physiologie vegetale 2008, 46(10):891–897.
2.Zhang X, Xu X, Yu Y, Chen C, Wang J, Cai C, Guo W: Integration analysis of MKK and MAPK family members highlights potential MAPK signaling modules in cotton. Scientific reports 2016, 6:29781.
3.Jonak C, Okresz L, Bogre L, Hirt H: Complexity, cross talk and integration of plant MAP kinase signalling. Current opinion in plant biology 2002, 5(5):415–424.
4.Cakir B, Kilickaya O: Mitogen-activated protein kinase cascades in Vitis vinifera. Frontiers in plant science 2015, 6:556.
5.Widmann C, Gibson S, Jarpe MB, Johnson GL: Mitogen-activated protein kinase: conservation of a three-kinase module from yeast to human. Physiol Rev 1999, 79(1):143–180.
6.Rodriguez MC, Petersen M, Mundy J: Mitogen-activated protein kinase signaling in plants. Annual review of plant biology 2010, 61:621–649.
7.Wang G, Lovato A., Liang Y. H., Wang, M., Chen, F., Tornielli G. B., Polverari A., Pezzotti M., Cheng Z. M. (Max) Validation by isolation and expression analyses of MAPK gene family in grapevine (Vitis vinifera). AUST J GRAPE WINE RES 2014, 2(20):255–262.
8.Colcombet J, Hirt H: Arabidopsis MAPKs: a complex signalling network involved in multiple biological processes. Biochem J 2008, 413(2):217–226.
9.Wang G, Wang T, Jia ZH, Xuan JP, Pan DL, Guo ZR, Zhang JY: Genome-Wide Bioinformatics Analysis of MAPK Gene Family in Kiwifruit (Actinidia Chinensis). International journal of molecular sciences 2018, 19(9).
10.Ichimura K, Shinozaki K, Tena G, Sheen J, Henry Y, Champion A, Kreis M, Zhang SQ, Hirt H, Wilson C et al: Mitogen-activated protein kinase cascades in plants: a new nomenclature. Trends in plant science 2002, 7(7):301–308.
11.Zhang S, Klessig DF: MAPK cascades in plant defense signaling. Trends Plant Sci 2001, 6(11):520–527.
12.Kim CY, Liu Y, Thorne ET, Yang H, Fukushige H, Gassmann W, Hildebrand D, Sharp RE, Zhang S: Activation of a stress-responsive mitogen-activated protein kinase cascade induces the biosynthesis of ethylene in plants. Plant Cell 2003, 15(11):2707–2718.
13.Pitzschke A, Schikora A, Hirt H: MAPK cascade signalling networks in plant defence. Current opinion in plant biology 2009, 12(4):421–426.
14.Rao KP, Richa T, Kumar K, Raghuram B, Sinha AK: In silico analysis reveals 75 members of mitogen-activated protein kinase kinase kinase gene family in rice. DNA Res 2010, 17(3):139–153.
15.Reyna NS, Yang Y: Molecular analysis of the rice MAP kinase gene family in relation to Magnaporthe grisea infection. Molecular plant-microbe interactions: MPMI 2006, 19(5):530–540.
16.Wu J, Wang J, Pan C, Guan X, Wang Y, Liu S, He Y, Chen J, Chen L, Lu G: Genome-wide identification of MAPKK and MAPKKK gene families in tomato and transcriptional profiling analysis during development and stress response. PloS one 2014, 9(7):e103032.
17.Hu N, Xian Z, Li N, Liu Y, Huang W, Yan F, Su D, Chen J, Li Z: Rapid and user-friendly open-source CRISPR/Cas9 system for single- or multi-site editing of tomato genome. Horticulture research 2019, 6:7.
18.Zhang T, Liu Y, Yang T, Zhang L, Xu S, Xue L, An L: Diverse signals converge at MAPK cascades in plant. Plant Physiol Biochem 2006, 44(5–6):274–283.
19.Teige M, Scheikl E, Eulgem T, Doczi R, Ichimura K, Shinozaki K, Dangl JL, Hirt H: The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis. Molecular cell 2004, 15(1):141–152.
20.Gao M, Liu J, Bi D, Zhang Z, Cheng F, Chen S, Zhang Y: MEKK1, MKK1/MKK2 and MPK4 function together in a mitogen-activated protein kinase cascade to regulate innate immunity in plants. Cell Res 2008, 18(12):1190–1198.
21.Qiu JL, Zhou L, Yun BW, Nielsen HB, Fiil BK, Petersen K, Mackinlay J, Loake GJ, Mundy J, Morris PC: Arabidopsis mitogen-activated protein kinase kinases MKK1 and MKK2 have overlapping functions in defense signaling mediated by MEKK1, MPK4, and MKS1. Plant physiology 2008, 148(1):212–222.
22.Matsuoka D, Nanmori T, Sato K, Fukami Y, Kikkawa U, Yasuda T: Activation of AtMEK1, an Arabidopsis mitogen-activated protein kinase kinase, in vitro and in vivo: analysis of active mutants expressed in E. coli and generation of the active form in stress response in seedlings. Plant J 2002, 29(5):637–647.
23.Brader G, Djamei A, Teige M, Palva ET, Hirt H: The MAP kinase kinase MKK2 affects disease resistance in Arabidopsis. Molecular plant-microbe interactions: MPMI 2007, 20(5):589–596.
24.Takahashi F, Yoshida R, Ichimura K, Mizoguchi T, Seo S, Yonezawa M, Maruyama K, Yamaguchi-Shinozaki K, Shinozaki K: The mitogen-activated protein kinase cascade MKK3-MPK6 is an important part of the jasmonate signal transduction pathway in Arabidopsis. The Plant cell 2007, 19(3):805–818.
25.Asai T, Tena G, Plotnikova J, Willmann MR, Chiu WL, Gomez-Gomez L, Boller T, Ausubel FM, Sheen J: MAP kinase signalling cascade in Arabidopsis innate immunity. Nature 2002, 415(6875):977–983.
26.Wang H, Ngwenyama N, Liu Y, Walker JC, Zhang S: Stomatal development and patterning are regulated by environmentally responsive mitogen-activated protein kinases in Arabidopsis. Plant Cell 2007, 19(1):63–73.
27.Takahashi Y, Soyano T, Kosetsu K, Sasabe M, Machida Y: HINKEL kinesin, ANP MAPKKKs and MKK6/ANQ MAPKK, which phosphorylates and activates MPK4 MAPK, constitute a pathway that is required for cytokinesis in Arabidopsis thaliana. Plant & cell physiology 2010, 51(10):1766–1776.
28.Yang KY, Liu Y, Zhang S: Activation of a mitogen-activated protein kinase pathway is involved in disease resistance in tobacco. Proceedings of the National Academy of Sciences of the United States of America 2001, 98(2):741–746.
29.Cardinale F, Meskiene I, Ouaked F, Hirt H: Convergence and divergence of stress-induced mitogen-activated protein kinase signaling pathways at the level of two distinct mitogen-activated protein kinase kinases. The Plant cell 2002, 14(3):703–711.
30.Kong F, Wang J, Cheng L, Liu S, Wu J, Peng Z, Lu G: Genome-wide analysis of the mitogen-activated protein kinase gene family in Solanum lycopersicum. Gene 2012, 499(1):108–120.
31.Wang G, Lovato A, Polverari A, Wang M, Liang YH, Ma YC, Cheng ZM: Genome-wide identification and analysis of mitogen activated protein kinase kinase kinase gene family in grapevine (Vitis vinifera). BMC plant biology 2014, 14:219.
32.Gao M, Liu J, Bi D, Zhang Z, Cheng F, Chen S, Zhang Y: MEKK1, MKK1/MKK2 and MPK4 function together in a mitogen-activated protein kinase cascade to regulate innate immunity in plants. Cell research 2008, 18(12):1190–1198.
33.Lee SK, Kim BG, Kwon TR, Jeong MJ, Park SR, Lee JW, Byun MO, Kwon HB, Matthews BF, Hong CB et al: Overexpression of the mitogen-activated protein kinase gene OsMAPK33 enhances sensitivity to salt stress in rice (Oryza sativa L.). Journal of biosciences 2011, 36(1):139–151.
34.Kong X, Pan J, Zhang D, Jiang S, Cai G, Wang L, Li D: Identification of mitogen-activated protein kinase kinase gene family and MKK-MAPK interaction network in maize. Biochemical and biophysical research communications 2013, 441(4):964–969.
35.Zhang S, Xu R, Luo X, Jiang Z, Shu H: Genome-wide identification and expression analysis of MAPK and MAPKK gene family in Malus domestica. Gene 2013, 531(2):377–387.
36.Chen L, Hu W, Tan S, Wang M, Ma Z, Zhou S, Deng X, Zhang Y, Huang C, Yang G et al: Genome-wide identification and analysis of MAPK and MAPKK gene families in Brachypodium distachyon. PloS one 2012, 7(10):e46744.
37.Hamel LP, Nicole MC, Sritubtim S, Morency MJ, Ellis M, Ehlting J, Beaudoin N, Barbazuk B, Klessig D, Lee J et al: Ancient signals: comparative genomics of plant MAPK and MAPKK gene families. Trends in plant science 2006, 11(4):192–198.
38.Wang N, Zheng Y, Xin H, Fang L, Li S: Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera. Plant Cell Rep 2012.
39.Wang H, Wang W, Li H, Zhang P, Zhan J, Huang W: Expression and tissue and subcellular localization of anthocyanidin synthase (ANS) in grapevine. Protoplasma 2011, 248(2):267–279.
40.Feechan A, Jermakow AM, Torregrosa L, Panstruga R, Dry IB: Identification of grapevine MLO gene candidates involved in susceptibility to powdery mildew. Funct Plant Biol 2008, 35(12):1255–1266.
41.Niu CF, Wei W, Zhou QY, Tian AG, Hao YJ, Zhang WK, Ma B, Lin Q, Zhang ZB, Zhang JS et al: Wheat WRKY genes TaWRKY2 and TaWRKY19 regulate abiotic stress tolerance in transgenic Arabidopsis plants. Plant, cell & environment 2012, 35(6):1156–1170.
42.Meszaros T, Helfer A, Hatzimasoura E, Magyar Z, Serazetdinova L, Rios G, Bardoczy V, Teige M, Koncz C, Peck S et al: The Arabidopsis MAP kinase kinase MKK1 participates in defence responses to the bacterial elicitor flagellin. The Plant journal: for cell and molecular biology 2006, 48(4):485–498.
43.Finkelstein RR, Gampala SS, Rock CD: Abscisic acid signaling in seeds and seedlings. The Plant cell 2002, 14 Suppl:S15–45.
44.Meng X, Zhang S: MAPK cascades in plant disease resistance signaling. Annual review of phytopathology 2013, 51:245–266.
45.Finn RD, Clements J, Eddy SR: HMMER web server: interactive sequence similarity searching. Nucleic Acids Res 2011, 39(Web Server issue):W29–37.
46.Grimplet J, Van Hemert J, Carbonell-Bejerano P, Diaz-Riquelme J, Dickerson J, Fennell A, Pezzotti M, Martinez-Zapater JM: Comparative analysis of grapevine whole-genome gene predictions, functional annotation, categorization and integration of the predicted gene sequences. BMC Res Notes 2012, 5:213.
47.Gonzalez-Mendoza D, Moreno AQ, Zapata-Perez O: An improved method for the isolation of total RNA from Avicennia germinans leaves. Z Naturforsch C 2008, 63(1–2):124–126.
48.Clough SJ, Bent AF: Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. The Plant journal: for cell and molecular biology 1998, 16(6):735–743.
49.Baumann K, De Paolis A, Costantino P, Gualberti G: The DNA binding site of the Dof protein NtBBF1 is essential for tissue-specific and auxin-regulated expression of the rolB oncogene in plants. The Plant cell 1999, 11(3):323–334.