Animals
All animal studies, containing rats euthanasia procedures, were approved and complied with AALAC and IACUC guidelines and guidelines for institutional animal care in Shanghai Jiao Tong University (Permit number: A2016077). Sixteen SD rats weighing 400-500 g within 18 days of gestation were bought from IACUC of Shanghai Jiao Tong University.
All rats did not carry viruses, bacteria and parasites. Animal health were continuously recorded by a sentinel program. Rats were kept in Individual ventilated plastic cages (420mm X 250mm X 230mm). A standard cardbox house was provided, autoclaved hay (about 8~12 g/cage) and two Nestlets™ (about 5 × 5 cm) were supplied. Rats were fed a pelleted rat diet by Jiangsu cooperative medical bio-engineering co..LTD and ordinary pure water after high temperature sterilization. The rats were housed in an environment with temperature of 23±2°C, relative humidity of 50 ±15% and a light/dark cycle of 12/12hr(approximately 20 lx in the cage), the air pressure was controlled at 10 Pa. HPLC(High Performance Liquid Chromatography)-grade acetonitrile and formic acid were purchased from Merck (USA), calibration solution for TOF-MS was bought from AB SCIEX (AB SCIEX,Foster City, USA), ultra-pure water was generated by a Milli-Q pure water system (Millipore,USA).
Experimental Protocol
Sprague Dawley (SD) pregnant rats, 3 months old, 400-500g weighing, were randomly divided in: sevoflurane group (S) or a control group (C) at gestational day (G) 18. Eight pregnant rats in each group were kept in a temperature humidity -controlled room with a 12-hour period of light and darkness from 3:00 to 15:00, The anesthesia chamber was given 2% sevoflurane and 100% oxygen for 6 hours in sevoflurane group. Control group was given 100% oxygen at the same flow rate in the same chamber for 6 hours. Parameter setting is 400 ml/min as the total gas flow. A gas analyzer (Drager, Lubeck, Germany) sustained to monitor oxygen, carbon dioxide and sevoflurane concentration. The rats kept with spontaneous breath. After sevoflurane termination, the rats were placed in a chamber containing 100% oxygen for 20 min. Pregnant mice arterial blood sample were collected and analyzed by i-STAT 1 Analyzer (MN: 300-G, Abbott Park, USA) immediately after termination of anesthesia. The control group (C) received 100% oxygen at an identical flow rate for 6 h in an identical chamber. Remaining rats were kept in the chamber for delivery, the offspring of sevoflurane group and control group were 40 and 42, respectively. A total of 24 (7- postnatal) rats were randomly selected from offspring rats of two groups (n=12 in each). Serum samples of offspring rats were frozen at −80°C for next analysis. In our study, the relevant details was as follows regarding the euthanization of study animals. Pregnant rats were sacrificed by cutting off the abdominal aorta under sevoflurane anesthesia or increasing the concentration of carbon dioxide in accordance with the animal laboratory's euthanasia method when they were taken blood from the abdominal aorta directly, The newborn rats were placed in a anesthetic box with a concentration of about 3% and then did decollation under anesthesia, Other rats of the experiments implemented euthanasia by increasing the concentration of carbon dioxide in accordance with the animal laboratory's euthanasia method.
Sample preparation and Ultra Performance Liquid Chromatography (UPLC) Analysis
Sample pretreatment requirement: 100 µl of neonatal rat serum (from sevoflurane and control group) was placed in a tube (pretreated with heparinization). Adding paclitaxel storage solution (100 µg/ml) 15 µl as internal reference material, then got methanol 300 µl, vortex oscillation 3 min, high-speed centrifugation (12000 r/min) centrifugation (4°C, 10 min), The supernatant of precision absorption was 200 µl, and the microporous filtration membrane (0.22 µm) was to be used. Chromatographic conditions: Waters Xterra MS C 8 column (2.1 × l00mm, 3.5 μ m). The mobile phase A: acetonitrile: isopropanol (5:2, v/v) contains 2 mmol/L ammonium acetate, 0.1% formic acid and 0.1% formic acid aqueous solution containing 2 mmol/L ammonium acetate. Gradient elution procedure: 0-1 min 10% A, 1 / 2 min 10-30% A, 2 / 4 min 30 / 50% A, 4 / 8 min 50 / 70% A, 8 / 12 min 70 / 100%, 1 / 2-24 min 100% A, 24-24.5 min 100-10% A, 24.5-30 min 10% A. Flow rate: 0.35 mL/min. Column temperature: 40 ℃. Sample volume: 10 µL. The method was used to analyze other lipid compounds (glyceryl ester, glycerol phospholipid, high abundance sphingolipid). The related substances were identified by ultra-high performance liquid chromatography (HPLC) with multi-reaction monitor.
Pattern recognition analysis based on PLS-DA
The score map was obtained by pattern recognition, and then the model was evaluated, the candidate heteron ions were added to the peptide segment. The (VIP) value of the variable projection importance marker in the PLS-DA model was used to screen the candidate differential protein. The partial least squares discriminant analysis (PLS-DA) was used to excavate the changes among different samples to determine the key ingredients. After dealing with the data, the data matrix containing sample variables was obtained, and the next metabolite was further analyzed. Compounds with projected value p < 0.05 and > 1.0 could be identified as potential biomarkers from the PLS-DA model.
Hematoxylin and Eosin (HE) Staining
HE staining was use to detect the neural cell apoptosis in both hippocampus and cerebral cortex of neonatal rats. HE staining: sections were separated, then treated by hydration, hematoxylin staining, 1% ethanol hydrochloric acid alcohol differentiation for 1s and eosin staining. The stained slices were dehydrated, encased in neutral balm, and covered with a coverslip. The microscope (Olympus) got the image at 400 x magnification.
TUNEL staining
Sections of the hippocampus and cerebral cortex of each group were frozen and soaked in 3% H2O2 phosphate buffer (PBS) to eliminate the endogenous peroxidase reaction. Washed 3 times, and 5 min once, then 20% fetal bovine serum (FBS) and 3% FBS protein were put into it for 15 min. After the TUNEL reaction solution was connected with fluorescein, the slices were placed in a humidifying box at 37 ℃ for 1 hour, then washed with PBS three times for 5 minutes. Then, the parts are re-evaluated. The termination solution at room temperature acted for 10 minutes, and the anti-digoxin peroxidase antibody acted for 30 minutes at 37 °C. It was washed three times with PBS for 5 minutes. Afterwards, The slices were made by 3,3'-diaminobenzidine, dyed by HE, transparent by xylene and sealed by neutral resin. The sections were then put down a fluorescence microscope. The TUNEL positive staining was observed under the S BX 51 Upright fluorescence microscope ( 400-fold, USA). The experiment was repeated four times. The apoptotic rate was calculated. The formula was that: apoptotic rate = TUNEL positive cells / the total cells.
RNA-seq and Real-time PCR (RT-PCR) Verification
The RNA was extracted by Trizol methods from the cortical cells (102 to 104) of the neonatal rats include sevoflurane group and control group, and we added 800 µ l TRIZOL reagent to the sample. After the sample was lysed, the samples were separated by adding chloroform. Before adding isopropanol to precipitate RNA, 5-10 µg RNA-free glycogen was added as aqueous phase carrier. In order to reduce the viscosity of the solution, the sample was cut through the 26 needles twice before chloroform was added to cut the genomic DNA. After two-phase separation, glycogen was left in the aqueous phase and co-precipitated with RNA. The real-time quantitative PCR reaction system consisted of 1µl cDNA, 1µl upstream and downstream primer mixture, 5µl premixed solution and 3 µl actinase water. Follow-up database construction and sequence analysis of full transcript was set by Cloudseq Biotech (Shanghai) Co.,Ltd. Relevant test for quality and RNA-seq sequencing was finished by above-mentioned company. The target gene RT-PCR was detected in SYBR Green (TaKaRa) system (LightCycler 480) when it was needed. Instruments included primer design software: Primer 5.0. and ViiA 7 Real-time PCR System (Applied Biosystems). The expression of related genes was administrated by quantitative RT-PCR for the verification of the significant gene, which was performed by the relevant instructions. To verify the accuracy based on the analysis of RNA-seq, the differential genes in relevant signaling pathway were tested in the samples. The gene relative expression was calculated, and GAPDH was used as internal reference for relative quantitative analysis.
Statistical Analysis
Data analyses were derived from using Graph Prism 5.0 software. Assumptions of normality and homogeneity of variance were first checked. Relevant data were expressed as the mean ± standard deviation. The independent samples t-test were used to analyze the differences between groups for continuous measures including Tunel or HE staining data. Multigroup comparisons of the means were carried out with Tukey post hoc tests. And a Partial Least Squares Discriminant Analysis (PLSDA) in MatLab (version 3.7.1) was used. There were statistically significant differences at a standard of P<0.05, The target genes candidates of DE miRNAs were used to KEGG enrichment analysis and pathway database [31-33]. Kobas [34] software is used to evaluate the statistical enrichment of candidate genes of KEGG pathway. We used QValue [35] to adjust the P value. Qvalue < 0.01 and | log2 (Foldchange) | > 1 are set as the standard of remarkably differential expression (DE). Pathways were identified to be significantly enriched when FDR<0.05.