Chemicals, reagents and bacterial strains
Luria-bertani (LB), mueller hinton agar (MHA), mueller hinton broth (MHB); cation-adjusted (CA)-MHB, nutrient broth (NB), trypticase soy broth (TSB), and agar were purchased from Becton Dickinson and Company (Becton Drive, NJ, United States), and sodium chloride and glucose were obtained from Scharlab (Barcelona, Spain). Quality control strains of E. coli (ATCC 25922) and S. Typhimurium (ATCC 14028), and clinical strains of S. Typhimurium (V08-S-HA-06-170, V15-S-HA-02-210, SAL 109, SAL 202 and SAL 224) were used in this study. Clinical strains used in this study were obtained from farms of different regions in the Republic of Korea. All the strains were cultivated in their respective growth media for 20 h in a rotating incubator at 200 rpm and 37 °C. Antibiotics used in this study include amoxicillin, ampicillin, cefotaxime, ceftiofur, erythromycin, florfenicol, marbofloxacin, norfloxacin, penicillin G and thiamphenicol. Galic acid, epicatechin, epicatechin gallate, epigallocatechin and hamamelitannin were utilized as antibacterial agent in this study. All the chemicals, reagents and media were from Sigma-Aldrich (St. Louis, MO, United States) unless otherwise mentioned.
Minimum inhibition concentrations of antibacterial agents
MICs of above mentioned commercial antibiotics and opportunistic antibacterial agents were determined by the standard broth microdilution method according to the CLSI guidelines [30] in CA-MHB using an inoculum concentration of ∼5 × 105 CFU/mL. Different antibacterial solutions were serially diluted in 96-well plates in 100 μL volumes. The cultures of different bacterial strains were diluted to adjust 0.5 McFarland units and, again diluted 100-times. Hundred microliters of these diluted bacterial suspensions were dispensed to all the wells of 96-well plates which contain 100 μL of antibacterial solution. After incubation at 35 °C overnight, the turbidity in each well was checked. The lowest concentrations of the antibacterial that completely inhibited any increase in turbidity were considered as the MICs.
Fractional inhibition concentration index of antibacterial agents
A slightly modified version of the previously described checkerboard microdilution method was utilized to determine the combination interactions of the commercial antibiotics and phenolic compounds [31]. One antibacterial agent was vertically diluted and the other antibacterial was horizontally diluted in 96-well plates to achieve a matrix of different combinations of the 2 antibacterials. Similar dilutions of individual drugs and the drug-free medium control were included in each test plate. Bacterial cultures in early log phase were diluted and 100 μL of the diluted bacterial suspension was added to each well of the 96-well plates, where the final inoculum concentration after transferring to each well would be ∼5 × 105 CFU/mL. Plated bacteria were incubated at 35 °C for 16 to 20 h. The fractional inhibitory concentration (FIC) and the FIC index (FICI) were calculated from the MICs of the drugs alone and in combination. The FIC is the MIC of a drug in presence of another drug divided by the MIC of the individual drug, and the FICI is the sum of the FICs of the individual drugs. An FICI of ≤ 0.5 is regarded as synergistic, 0.5 < FICI ≤ 1 is considered additive, 1 < FICI ≤ 2 is considered indifferent, and an FICI > 2 is considered antagonistic effects [32].
Effect of antibacterial combinations on bacterial inhibition rates
The time-dependent inhibition effects of gallic acid-ceftiofur against S. Typhimurium and hamamelitannin-erythromycin and gallic acid-ampicillin against E. coli were evaluated according to a previously reported method [24]. Drug compounds alone and in combination were supplemented in 10 mL MHB broth in 15 mL falcon tubes. Bacterial cultures in early log phase were diluted and then resuspended in the drug-supplemented broth to a final inoculum concentration of 5 × 106 CFU/mL. A tube containing 5 × 106 CFU/mL of bacteria in 10 mL MHB without any drug was used as a control. The samples were incubated at 37 °C at 200 rpm in a shaking incubator. At different time points (0, 1, 2, 3, 4, 6, 8, 12, and 24 h) 100 μL of the cultures were collected from all tubes and serially diluted 10-fold in agar saline. Aliquots of the 10-fold dilutions (20 μL) were spread on Mueller Hinton agar (MHA) plates and incubated overnight at 37 °C. The CFUs of the cultures were determined by counting the number of colonies from each dilution. The mean log10 CFU/mL for each compound was plotted against different times.
Effect of antibacterial combinations on bacterial cell morphology
The effects of the gallic acid-ceftiofur combination on the morphology of S. Typhimurium and the hamamelitannin-erythromycin and gallic acid-ampicillin combinations on the morphology of E. coli cells were evaluated. Drug compounds alone or in combination were supplemented into 10 mL of MHB broth in 15 mL falcon tubes. Bacterial cultures in early log phase were diluted and then resuspended in the drug-supplemented broth to a final inoculum concentration of 5 × 106 CFU/mL. A tube containing 5 × 106 CFU/mL of bacteria in 10 mL MHB without any drug was used as a control. The bacteria in tubes were incubated overnight at 37 °C and 200 rpm in a shaking incubator. Then, the cells were harvested, washed, and dehydrated according to a previously reported protocol [33]. The ultrastructural morphology of treated S. Typhimurium and E. coli cells was studied using a scanning electronic microscope (SEM; models S-4300 and EDX-350; Hitachi, Japan).
Effect of antibacterial combinations on biofilm growth and viability
The inhibitory effect of combination antibacterials on biofilm formation was determined using slightly modified version of a previously reported spectrophotometric method [34, 35]. Briefly, test compounds were supplemented into TSB in three separate wells of a 96-well microplate for each concentration. The final concentrations of the test compounds alone or in combination (gallic acid-ceftiofur, gallic acid-ampicillin and hamamelitannin-erythromycin) were ¼MIC, ½MIC and 1MIC after bacterial inoculation. Cultures of S. Typhimurium and E. coli were incubated for 18 h in a rotating incubator at 200 rpm and 37 °C. The bacterial cultures were diluted in TSB, and then 100 μL of the diluted cultures were added to the designated wells to a final cell density of 1 × 106 CFU/mL after inoculation. The optical densities of the bacteria in the wells of a 96-well plate were measured at 600 nm instantly after inoculating bacteria. The bacteria in the 96-well plate with drugs were incubated for 24 h at 37 °C, and after incubation, the optical densities were again measured to determine the growth of planktonic cells. Then the supernatants from the wells of a 96-well plate were discarded carefully without affecting the biofilms which are attached on the well-surfaces. The adherent media and drug components were removed by washing the wells three-times with sterile phosphate buffer saline (PBS, pH 7.2). Then, 200 μL of methanol (99%, v/v) were dispensed to the wells, and kept for 20 min to fix the biofilms. The biofilms were then stained by introducing 100 μL of crystal violet (0.2%, w/v) solution to the wells and keeping at room temperature for 15 min. The excess or unbound crystal violet in the wells was removed by four-times washing with PBS. The crystal violet on the biofilm cells was extracted in 100 μL of 95% ethanol, and their optical densities (OD) were measured, which yields a measure of biofilm formation (compared to the control). Measurements were performed in triplicate and repeated 3 times.
Previously, reported biofilm viability assay methods were utilized to evaluate the effects of combination drugs on the viability of the biofilms produced by S. Typhimurium and E. coli [23, 36]. In brief, sterile TSB broth of 2 mL were transferred to a Nunc™ Lab-Tek™ II Chambered Cover glass (ThermoFisher Scientific, Waltham, MA, United States), and diluted cultures of S. Typhimurium and E. coli were inoculated into the broth to a final concentration of 1 × 106 CFU/mL. The Nunc™ Lab-Tek™ II Chambered Cover glass which contain S. Typhimurium and E. coli cells were kept in a static incubator at 37 °C until 48 h for biofilm formation. Every 24 h, the TSB broth used in biofilm formation was replaced by fresh, sterile TSB broth. The supernatants and planktonic cells were discarded after incubating the bacteria for 48 h, and the chambered cover glasses were washed by 1× PBS. Then, 2 mL of sterile TSB containing the test compounds alone or in combination (gallic acid-ceftiofur, gallic acid-ampicillin and hamamelitannin-erythromycin) at ¼MIC, ½MIC and 1MIC concentrations were added. The biofilms were again kept in a static incubator at 37 °C for 24 h to treat the developed-biofilm cells. After 24 h of exposure to the test compounds, the biofilms were again washed with sterile double distilled water (DDW) and stained with BacLight live/dead stain (ThermoFisher Scientific, Waltham, MA, United States). Confocal laser scanning microscope (CLSM) was used to scan the viable and nonviable biofilms. Imaging was performed with a Zeiss LSM 700 CLSM (Zeiss, Oberkochen, Germany) within the 488 nm excitation and 560–600 nm emission range. Zen 2009 software was used to execute image acquisition as well as subsequent image manipulation. Untreated biofilm was used as a control.
Effect of antibacterial combinations on the motility of bacterial cells
The swarming and swimming motilities of E. coli (ATCC 25922) and S. Typhimurium (ATCC 14028) in the presence of the combination drugs were evaluated according to previously published methods with slight modifications [37, 38]. The media used for the E. coli (ATCC 25922) swarming assay was composed of 0.8% Luria-Bertani (LB) supplemented with 0.5% glucose and 0.6% agar. Nutrient broth (NB) supplemented with 0.5% glucose and 0.5% agar was used for the evaluation of S. Typhimurium (ATCC 14028) swarming motility. The media used to evaluate E. coli swimming activity was composed of 1% tryptone broth supplemented with 0.5% NaCl and 0.3% agar. Nutrient broth supplemented with 0.5% glucose and 0.25% agar was used as the media for the S. Typhimurium swimming motility assay. Molten agar plates were supplemented with ¼MIC, ½MIC and 1MIC concentrations of test compounds alone or in combination (gallic acid-ceftiofur, gallic acid-ampicillin and hamamelitannin-erythromycin). A non-supplemented drug free plate was employed as the negative control. The plates were allowed to dry for 1 h and then 2 μL of E. coli and S. Typhimurium cultures were inoculated onto the respective swarming and swimming agar plates. For both strains, swarm plates were kept at 37 °C overnight, whereas swim plates were incubated at 37 °C for 10 h. After incubation, the swarm and swim zone diameters were measured using calibrated digital slide callipers (Mitotoyo, Japan), and photographs of the plates were captured.
Cell viability in the presence of antibacterial agents
The in vitro viability of human hepatocyte (Hep G2; American Type Culture Collection HB-8065, VA, United States) and Rattus norvegicus small intestine (IEC-6; American Type Culture Collection CRL-1592, VA, United States) cell lines in the presence of gallic acid, hamamelitannin, ampicillin, ceftiofur and erythromycin alone, and combinations of gallic acid-ceftiofur, gallic acid-ampicillin and hamamelitannin-erythromycin were evaluated according to standard EZ-cytox (EZ-1000; Daeillab Service Co. Ltd., Jeonju, South Korea) assay method. In brief, Hep G2 cells were cultured in foetal bovine serum (FBS, 10%) and penicillin/streptomycin (1%) solution-supplemented Eagle's Minimum Essential Medium (EMEM; ThermoFisher Scientific, Waltham, MA, United States) at 37 °C under a humidified atmosphere of 5% carbon dioxide (CO2). Whereas, the IEC-6 cells were cultured at 37 °C under a humidified atmosphere of 5% carbon dioxide (CO2) in Dulbecco's Modified Eagle's medium (DMEM; ThermoFisher Scientific, Waltham, MA, United States) with 4 mM L-glutamine (ThermoFisher Scientific, Waltham, MA, United States), adjusted to contain 1.5 g/L sodium bicarbonate (Carolina Biological Supply Company, Burlington, NC, United States) and 4.5 g/L glucose and supplemented with 0.1 Unit/mL bovine insulin (90%) and FBS (10%). Both types of cells were subpassaged at a ratio of 1:5 twice a week. One hundred microliters of suspended cells (2 × 104 cells/mL in their respective culture medium) were acclimated in 96-well plates at 37 °C under 5% CO2 for 24 h. The medium from each well was aspirated and the cells were washed twice. One hundred microliters of the test compounds at various concentrations in their respective culture medium were dispensed into each well and the cells in the drug-supplemented medium were allowed to incubate at 37 °C under 5% CO2 for 24 h. A total of 10 µL of EZ-cytox were added to each well. After incubation for 2 h, the absorbances in each well were measured at 450 nm using a plate reader. Cells not treated with any drugs were assigned as the control. The cell viability (%) was calculated by the following formula, and values of cell viability (%) at different drug concentrations were used to determine the inhibitory concentration 50% (IC50):
Cell viability (%) = (OD of drug-treated sample/OD of untreated sample) × 100, where OD is the optical density [39].
Statistical analysis
Results are presented as the means ± standard deviation (SD) of triplicate analysis. Statistical analysis was carried out by using SAS software (SAS Institute Inc., Cary, NC, USA). One-way analysis of variance (ANOVA) followed by F-test was used to compare the results. Statistical significance was considered when the P-value was <0.05.