The clinical significance of macrophages infiltration and aPKCι in human CCA
To better understand the role of macrophages in the cholangiocarcinoma tumor environment (TME), we employed the 10x Genomics single-cell sequencing technology to reveal the phenotype and function of myeloid immune cells in human cholangiocarcinoma. As shown in Fig. 1A, the myeloid immune cells in CCA tumor and paratumor tissues are mainly divided into 4 cell subtypes after dimensionality reduction cluster analysis: M1 macrophage subtype, M2 macrophage subtype, a classical dendritic cell subtype and a plasmacytoid dendritic cell subtype. We found that the proportion of M1 macrophages in tumor tissue was lower than that in paratumor tissue (42.18% vs 70.09%), whereas the proportion of M2 macrophages was higher in tumor tissue (25.09% vs 2.78%). Despite a greater proportion of M1 macrophages in the TME, M2 macrophages expressed higher gene level of CD163, MRC1 (CD206), TGF-β, IL10, VEGFA, and MMP9, which exhibited stronger tumor-promoting ability (Fig. 1B).
To investigate the clinical significance of macrophage infiltration and aPKCι expression in human CCA, we examined aPKCι and TAMs markers (macrophage: CD68; M1 macrophage: CD80; M2 macrophage: CD206) expressed in human CCA by immunohistochemistry (IHC), Western blotting (WB), and quantitative real-time polymerase chain reaction (qRT-PCR). The IHC analysis showed that staining of aPKCι, CD68, and CD206 was enriched in CCA tissues than pair-matched paratumor tissues (Fig. 1C-D). Consistent results were verified by WB and qRT-PCR (Supplementary Fig. 1A-B). Then, we analyzed the association between aPKCι and TAMs markers in CCA specimens. Pearson correlation analyses of the above IHC results confirmed that expression of aPKCι was positively correlated with CD68 (r = 0.4128, P = 0.0004) and CD206 (r = 0.5489, P < 0.0001). However, there was no significant correlation between aPKCι and CD80 (r = 0.0540, P = 0.6569) (Supplementary Fig. 1C).
We further explored the correlation of aPKCι expression and macrophage infiltration with the clinicopathological characteristics and prognosis in patients with CCA. Notably, overexpression of aPKCι and CD206 was remarkably associated with lymph node metastasis (χ2 = 6.005, 4.086; P = 0.014, P = 0.043, respectively), tumor-node-metastasis (TNM) stage III-IV (χ2 = 6.740, 12.899; P = 0.009, P < 0.001), and moderate/poor differentiation (χ2 = 3.994, 4.073; P = 0.046, P = 0.044). High level of CD68 was just related to lymph node metastasis (χ2 = 4.076; P = 0.044) and tumor-node-metastasis (TNM) stage III-IV (χ2 = 5.871; P = 0.015), while CD80 was not associated with clinicopathological characteristics (Table 1). Moreover, a Kaplan-Meier analysis revealed that patients with high level of aPKCι, CD68 or CD206 rather than CD80 displayed worse overall survival (OS). Prognosis was also statistically associated with the co-expression of aPKCι and CD68/CD206 (Fig. 1E). Multivariate Cox regression analyses indicated that aPKCι and CD206 were independent prognostic factors for OS in CCA patients (Supplementary Table 1). These data imply that aPKCι and CD206+ macrophage (M2 macrophage), but not CD80+ macrophage (M1 macrophage), may contribute to the progression and dismal prognosis of CCA.
Table 1
Correlation Between aPKCι, CD68, CD80, CD206, NF-κB, and Clinicopathologic Characteristics in 70 CCA Patients
|
|
aPKCι
|
|
CD68
|
|
CD80
|
|
CD206
|
|
NF-κB
|
|
Group
|
n
|
Low
|
High
|
P
|
Low
|
High
|
P
|
Low
|
High
|
P
|
Low
|
High
|
P
|
Low
|
High
|
P
|
Age (years)
|
|
|
|
|
≤ 60
|
37
|
19
|
18
|
0.208
|
12
|
25
|
0.449
|
18
|
19
|
0.602
|
19
|
18
|
0.622
|
19
|
18
|
0.316
|
> 60
|
33
|
12
|
21
|
8
|
25
|
14
|
19
|
15
|
18
|
13
|
20
|
Gender
|
|
|
|
|
male
|
36
|
17
|
19
|
0.611
|
10
|
26
|
0.880
|
12
|
24
|
0.089
|
16
|
20
|
0.477
|
17
|
19
|
0.794
|
female
|
34
|
14
|
20
|
10
|
24
|
20
|
14
|
18
|
16
|
15
|
19
|
Lymphoid nodal status
|
|
|
|
|
No
|
45
|
24
|
21
|
0.041
|
16
|
29
|
0.044
|
20
|
25
|
0.866
|
25
|
18
|
0.043
|
28
|
15
|
< 0.001
|
Yes
|
25
|
7
|
18
|
4
|
21
|
12
|
13
|
9
|
18
|
4
|
23
|
TNM staging
|
|
|
|
|
I-II
|
33
|
20
|
13
|
0.009
|
14
|
19
|
0.015
|
16
|
17
|
0.819
|
24
|
9
|
< 0.001
|
25
|
8
|
< 0.001
|
III-IV
|
37
|
11
|
26
|
6
|
31
|
16
|
19
|
11
|
26
|
7
|
30
|
Differentiation
|
|
|
|
|
Well
|
27
|
16
|
11
|
0.046
|
9
|
18
|
0.485
|
11
|
16
|
0.508
|
17
|
10
|
0.044
|
16
|
11
|
0.071
|
Moderate/Poorly
|
43
|
15
|
28
|
11
|
32
|
21
|
22
|
17
|
26
|
16
|
27
|
M2 macrophages induce aPKCi-mediated CCA cell chemoresistance to GEM
To study the contribution of M2 macrophages and aPKCι to chemoresistance, we investigated the efficacy of postoperative GEM-based chemotherapy in CCA patients. As shown in Supplementary Fig. 2A, chemotherapy did not provide apparent survival benefit in CCA patients. However, we found patients with high aPKCι expression exhibited no response to postoperative chemotherapy, while patients with low aPKCι expression responded well (Fig. 2A). Consistently, patients with low CD206+ macrophage infiltration displayed a favorable outcome after postoperative chemotherapy, whereas no apparent benefit was found in patients with high CD206+ macrophage infiltration (Fig. 2A). These findings indicate that aPKCι and M2 macrophage infiltration are associated with chemoresistance in CCA.
To identify the effects of M2 macrophages on CCA cells, we applied a model of macrophage polarization involving the differentiation of peripheral blood mononuclear cells (PBMCs) for further analysis (Supplementary Fig. 2B). Flow cytometry and RT-PCRs were employed to analyze the phenotype of macrophages. The M2 macrophage characteristics were confirmed by the reduced expression of M1 markers (CD80 and IL-12) and the elevated expression of M2 markers (CD206 and IL-10) (Supplementary Fig. 2C-D). Consequently, we examined whether M2 macrophages could protect CCA cells from GEM chemotherapy. As shown in Fig. 2B, compared with control medium and MΦ-CM treatments, M2-CM treatment significantly reduced the sensitivity of CCA cells to GEM. Next, FACS, which was employed to detect apoptosis indicated that M2-CM treatment notably reduced the apoptosis of CCA cells induced by 10µM GEM relative to control medium and MΦ-CM treatments (Fig. 2C). Previous studies have shown that elevated aPKCι expression provides resistance to drug-induced apoptosis19. To verify whether aPKCι is involved in the M2-CM-mediated protection of CCA cells against GEM-induced apoptosis, we established aPKCι-deficient CCA cell lines by transfection with aPKCι-siRNA (Supplementary Fig. 2E). WB analysis showed that the protein level of cleaved caspase-3 in cells treated with GEM plus M2-CM was markedly decreased compared to that in cells treated with GEM plus control medium. aPKCι depletion resulted in loss of the M2-CM-mediated protective effect (Fig. 2D). Interestingly, the level of phosphorylated-aPKCι was significantly increased in CCA cells after M2-CM treatment, while the level of aPKCι was not affected (Fig. 2D). We further found that the IC50 value for GEM was drastically increased in aPKCι-overexpression CCA cells, but decreased in aPKCι-silenced cells (Fig. 2E and Supplementary Fig. 2F). Moreover, FACS was employed to validate the anti-apoptosis role of aPKCι in CCA cells and found that upregulated aPKCι significantly reduced the GEM-induced apoptosis rates of CCA cells (Fig. 2F). However, overexpressing or silencing aPKCι only resulted in a slight change in the apoptosis rate of CCA cells without GEM treatment (Supplementary Fig. 2G). These results indicate that aPKCι may play a key role in M2 macrophage-induced CCA cell GEM resistance.
aPKCi mediates NF-kB activation contributing to M2 macrophages-induced chemoresistance
Growing evidences have demonstrated that aPKCι activates NF-κB signaling in multiple tumor types20 − 22 and that NF-κB is a major transcription factor associated with the immune microenvironment23, 24, chemoresistance25 and EMT26, 27. To further explore the mechanism by which aPKCι promotes CCA cells survival, we investigated the role of the NF-κB signaling pathway. We found that overexpressing aPKCι induced p65 phosphorylation and nuclear translocation (Fig. 3A and Supplementary Fig. 3A) and enhanced NF-κB transcriptional activity (Fig. 3B). Subsequently, WB was employed to validate that aPKCι mediates NF-κB activation in M2 macrophage-induced GEM resistance. We found that M2-CM induced aPKCι phosphorylation and NF-κB activation in the presence of GEM, while aPKCι-siRNA treatment attenuated these effects (Fig. 3C). Furthermore, we assessed whether the NF-κB signaling was required for aPKCι-induced chemoresistance. We blocked the NF-κB signaling pathway by pharmacologically employing pyrrolidinedithiocarbamate ammonium (PDTC 50umol/L) or genetically exerting a dominant negative mutant of IκBα. Inhibition of NF-κB signaling enhanced the GEM-induced apoptosis rates and reduced the IC50 value of GEM in aPKCι-overexpressing CCA cells (Fig. 3D-E). Anchorage-independent growth of aPKCι-overexpressing CCA cells, treated with GEM (10µM), was suppressed in the presence of PDTC (Supplementary Fig. 3B).
Based on these findings, the clinical significance of nuclear NF-κB (P65) expression was characterized in human CCA. The IHC analysis showed that staining of nuclear NF-κB was enriched in CCA tissues than pair-matched paratumor tissues (Fig. 3F). Then, we analyzed the association between NF-κB and aPKCι/CD206 in CCA specimens. Pearson correlation analyses of the IHC results confirmed that expression of nuclear NF-κB (P65) was significantly correlated with aPKCι (r = 0.6992, P < 0.0001) and CD206 (r = 0.5495, P < 0.0001) (Fig. 3G). Moreover, the positive immunoreactivity of nuclear NF-κB was significantly associated with lymph node metastasis (χ2 = 16.911, P < 0.001) and tumor-node-metastasis (TNM) stage III-IV (χ2 = 22.707, P < 0.001) as shown in Table 1. The group with low nuclear NF-κB expression had better prognosis (Fig. 3H). Importantly, the prognosis was also statistically associated with the co-expression of aPKCι and CD206 (Fig. 3H and Supplementary Fig. 3C). These results indicated that aPKCι mediates NF-κB activation to contribute to M2 macrophages-induced GEM resistance.
In terms of a mechanism, previous research has confirmed that the aPKCι could bind to P62 through a PB1-PB1 domain interaction that regulates NF-κB activation22. Therefore, we assessed whether this mechanism exists in CCA. We performed Co-IP experiments and found that aPKCι immunoprecipitated with P62, and in turn, P62 was detected in the aPKCι-immunoprecipitates (Supplementary Fig. 3D upper). To determine the molecular surfaces through which the aPKCι and P62 interaction occur, we constructed Flag-tagged wild-type and site-specific mutants (aPKCι-D72A, P62-K7A) of these proteins based on previously reported research findings28 − 30. IP experiments showed that the interaction of aPKCι with P62 requires the wild-type PB1 domain, and the D72A mutation in the PB1 domain of aPKCι abolished the interaction with P62 (Supplementary Fig. 3D bottom). In addition, WBs and luciferase reporter gene assays showed that NF-κB phosphorylation and transcriptional activity are regulated by P62. The K7A mutation in the PB1 domain of P62 abolished the WT effects (Supplementary Fig. 3E-F). This observation is similar to that of Wooten et al31. These results provide evidence that aPKCι may regulate NF-κB activation by interacting with P62.
TAMs-derived TGFβ1 induce CCA cell EMT via the aPKCι and NF-κB activation
TGFβ1 is well known to facilitate tumor formation and development32. Coincidentally, it is also one of the major cytokines secreted by TAMs5. Consistent with the results of the 10x Genomics single-cell sequencing technology in human cholangiocarcinoma, ELISA and qPCR showed that TGFβ1 was dramatically upregulated in intracellular and supernatant of M2 macrophages compared with MΦ/M1 macrophages (Supplementary Fig. 4A). Therefore, we hypothesized that M2 macrophages-derived TGFβ1 might contribute to the promotion of CCA cell EMT. We have previously demonstrated the critical role of aPKCι in TGFβ1-induced EMT in CCA cells33. Here, we found that TGFβ1 induced aPKCι and NF-κB phospho-activation in a time-dependent manner, whereas aPKCι-siRNA treatment attenuated the effects (Fig. 4A). Moreover, the levels of p-aPKCι and p-NF-κB were increased in aPKCι-transduced CCA cells treated with M2-CM, while anti-TGFβ1 neutralizing antibody or LY2157299 (a selective TGFβ receptor inhibitor) treatment reversed the above effects (Fig. 4B). Similarly, we found that TGFβ1 induced NF-κB transcriptional activity and nuclear translocation, and this response was dependent on aPKCι, because aPKCι depletion through siRNA resulted in loss of the effect (Fig. 4C-D and Supplementary Fig. 4B).
We have found that aPKCι induces EMT-like protein expression15 (Supplementary Fig. 4C), it was not surprising to see that the morphology of CCA cells treated with M2-CM changed from a broad elliptical shape to a long fusiform shape. The M2-CM-treated CCA cells had reduced expression of E-cadherin and increased expression of vimentin, which facilitates migration and invasiveness. However, anti-TGFβ1 neutralizing antibody or LY2157299 treatment suppressed the above EMT changes, TGFβ1 treatment alone acted as a positive control, suggesting that M2 macrophages-derived TGFβ1 induced CCA cell EMT (Fig. 4E-F and Supplementary Fig. 4D-E). Meanwhile, to further investigate whether NF-κB activation was essential for M2 macrophages-derived TGFβ1-induced CCA cells EMT, we employed PDTC to block the NF-κB signaling pathway. Strikingly, the inhibition caused reversal of TGFβ1-induced EMT, including up-regulation of E-cadherin, down-regulation of vimentin, as well as decreased capacity of cell invasion and migration (Fig. 4E-F and Supplementary Fig. 4D-E). Collectively, these data suggested that TAMs-derived TGFβ1 induces CCA cell EMT via the aPKCι/NF-κB pathway.
CCL5 secreted by aPKCι-induced mesenchymal-like CCA cells mediates the chemotactic migration and activation of macrophages
To investigate whether mesenchymal-like CCA cells activate macrophages, we cocultured mesenchymal-like CCA cell lines by aPKCι transfection with PBMCs-induced macrophages. Flow cytometry showed that the proportions of M2 macrophages were significantly increased compared to macrophages cultured with the control group (Supplementary Fig. 5A). Moreover, cell migration assay revealed that CCA cells with aPKCι overexpression promote the CD14 + monocytes recruitment (Supplementary Fig. 5B). To understand how aPKCι-induced mesenchymal-like CCA cells exert their functions, we employed a human inflammation antibody array to identify the profile of cytokines secreted by mesenchymal-like TFK-1 cells. Interestingly, CCL5, which is a target gene of NF-κB34 and an established chemoattractant for macrophages35, was found among these cytokines (Fig. 5A). In agreement, ELISA and qRT-PCR assays confirmed the increase of CCL5 production in mesenchymal-like CCA cells mediated by aPKCι. Meanwhile, we found that NF-kB inhibition through PDTC resulted in loss of the aPKCι-mediated effect (Fig. 5B). To assess whether TGFβ1 and NF-κB transcription factors activate CCL5 promoter activity, luciferase reporter gene assays were performed using a CCL5 promoter with a mutated NF-κB binding site (Supplementary Fig. 5C). As expected, TGFβ1 treatment increased the transcriptional activity of CCL5, and the NF-κB binding site mutation in the CCL5 promoter attenuated this effect (Fig. 5C). On the basis of our data, we speculate that aPKCι/NF-κB/CCL5 signaling is involved in the macrophages recruitment and activation. To further verify our hypothesis we could show that CCL5 treatment enhanced M2 macrophage polarization and CD14+ monocytes recruitment, whereas targeting CCL5 with neutralizing antibodies potently abrogated the effects. Moreover, we also found that PDTC treatment attenuate these effects (Fig. 5D-E and Supplementary Fig. 5D). These findings indicated that TGFβ1 could induce the expression and secretion of CCL5 in CCA to mediate the chemotactic migration and activation of macrophages by aPKCι/NF-κB signaling pathway.
Finally, we performed WB to analyze the mechanism of macrophages activation, and several classical signaling pathways involved in macrophage functions were evaluated. The results suggest that the activation of STAT3 signaling may be involved in CCL5-mediated macrophage recruitment and M2 polarization (Supplementary Fig. 5E).
The macrophage-aPKCι-CCL5 feedback loop promotes CCA growth and metastasis in vivo
To investigate the crucial role of TAMs in the aPKCι-mediated progression of CCA in vivo, we established a xenograft model and lung metastasis model of human CCA according to the schematic shown in Fig. 6A and 6D. We found that the growth of xenografts was inhibited (Fig. 6B and Supplementary Fig. 6A) and the number of metastatic nodules was reduced after macrophages were selectively depleted (Fig. 6E). Notably, the depletion of macrophages resulted in a reduction in p-aPKCι expression (Fig. 6C, F and Supplementary Fig. 6B). These results suggest that the effect of TAMs on CCA progression in vivo may be mediated by the aPKCι signaling pathway. To further investigate the mechanism by which aPKCι regulates CCA development and the interaction between mesenchymal-like CCA cells and macrophages, we stably upregulated aPKCι expression in CCA cell lines. The macrophages recruitment experiment (Fig. 6G) demonstrated that aPKCι overexpression promoted tumor progression (Fig. 6H and Supplementary Fig. 6C). Furthermore, the number of F4/80+ macrophages in aPKCι-derived xenografts was higher than that in the negative control xenografts (Fig. 6I and Supplementary Fig. 6D). Because the CCL5-CCR5 axis is a major regulator of macrophage recruitment36, 37, we investigated the role of aPKCι/CCL5 pathway in regulating macrophage recruitment in vivo. There was a greater infiltration of CCR5+ macrophages in aPKCι-derived tumors than control tumors, and antagonizing the CCL5-CCR5 axis significantly reversed this effect and decreased tumor development. These findings suggest that the effects of aPKCι overexpression on CCA progression are dependent on CCL5-mediated macrophage infiltration. Importantly, we observed that the reduction in macrophage recruitment potently inhibits the expression of p-aPKCι in CCA xenografts (Fig. 6I and Supplementary Fig. 6D). Combined with all the in vitro results, these findings suggest that aPKCι-induced CCL5 from mesenchymal-like CCA cells and TGFβ1 from TAMs form a positive feedback loop and promote CCA progression, and that aPKCι plays a key role in this process.
Co-delivery of aPKCι-siRNA and GEM via liposomes for the effective treatment of CCA
All liposomes were prepared as shown in Materials and Methods. Then, they were characterized to ensure that they qualified as liposomes. The key physicochemical characteristics of GEM-L and GEM-aPKCι-siRNA-L are shown in Supplementary Fig. 7. A soft agar growth assay was employed to evaluate the inhibitory effect of the various formulations. Compared to other treatment groups, the GEM-aPKCι-siRNA-L group showed significant inhibition of CCA cells anchorage-independent growth (Fig. 7A). To further evaluate the antitumor efficacy of the various formulations, we established a xenograft model of human CCA according to the schematic shown in Fig. 7B. Notably, consistent with the in vitro findings, Gem-aPKCι-siRNA-L-treated tumors had the smallest sizes among those of all treatment groups (Fig. 7C). To demonstrate the key role of aPKCι-siRNA in the inhibition of tumor growth, we sectioned the xenografts and analyzed the expression of aPKCι. We found that aPKCι-siRNA effectively interfered with aPKCι protein expression in vivo only when it was delivered effectively by liposomes. Furthermore, we observed a significant decrease in the number of F4/80+ macrophages when aPKCι was effectively knocked down (Fig. 7D). In addition, we found that treatment with GEM increased NF-κB expression (Fig. 7D). These data preliminarily suggest that the co-delivery of aPKCι-siRNA and GEM via liposomes produces enhanced antitumor effects in CCA.
Together, our results show that the Macrophages-aPKCι-CCL5 feedback loop between mesenchymal-like cancer cells and TAMs promotes CCA progression and chemoresistance. Moreover, the liposome-encapsulated aPKCι-siRNA and GEM antagonized CCA GEM chemoresistance (Fig. 7E and F).