27. Schutte, V. G. W., Selig, E. R., and Bruno, J. F. (2010). Regional spatio-temporal trends in Caribbean coral reef benthic communities. Mar. Ecol. Prog. Ser. 402, 115–122. doi:10.3354/meps08438.
28. Selig, E. R., and Bruno, J. F. (2010). A global analysis of the effectiveness of marine protected areas in preventing coral loss. PLoS One 5, 1–7. doi:10.1371/journal.pone.0009278.
29. Coles, S. L., and Brown, E. K. (2007). Twenty-five years of change in coral coverage on a hurricane impacted reef in Hawai’i: The importance of recruitment. Coral Reefs 26, 705–717. doi:10.1007/s00338-007-0257-3.
30. Carleton, J. H., and Done, T. J. (1995). Quantitative video sampling of coral reef benthos: large-scale application. Coral Reefs 14, 35–46.
31. Rogers, C. S., and Miller, J. (2001). Coral bleaching, hurricane damage, and benthic cover on coral reefs in St. John, U.S. Virgin Islands: A comparison of surveys with the chain transect method and videography. Bull. Mar. Sci. 69, 459–470.
32. Leujak, W., and Ormond, R. F. G. (2007). Comparative accuracy and efficiency of six coral community survey methods. J. Exp. Mar. Bio. Ecol. 351, 168–187. doi:10.1016/j.jembe.2007.06.028.
33. Wilson, S. K., Graham, N. A. J., and Polunin, N. V. C. (2007). Appraisal of visual assessments of habitat complexity and benthic composition on coral reefs. Mar. Biol. 151, 1069–1076. doi:10.1007/s00227-006-0538-3.
34. Graham, N. A. J., Nash, K. L., and Kool, J. T. (2011). Coral reef recovery dynamics in a changing world. Coral Reefs 30, 283–294. doi:10.1007/s00338-010-0717-z.
35.Thomas J. Leeper (2018). tabulizer: Bindings for Tabula PDF Table Extractor Library. R package version 0.2.2.
36. Rohatgi, A. (2018). WebPlotDigitizer. Available at: https://automeris.io/WebPlotDigitizer.
37. Darling, E. S., Alvarez-Filip, L., Oliver, T. A., Mcclanahan, T. R., and Cote, I. M. (2012). Evaluating life-history strategies of reef corals from species traits. Ecol. Lett. 15, 1378–1386. doi:10.1111/j.1461-0248.2012.01861.x
38. Trice, T., and Landsea, C. (2020). HURDAT: Hurricane Re-Analysis Project. R package version 0.2.3.1. https://CRAN.R-project.org/package=HURDAT
39. Elsner, J. B., and Jagger, T. H. (2013). Hurricane Climatology: A modern statistical guide using R. New York, NY: Oxford University Publishing.
40. Done, T. J. (1992). Effects of tropical cyclone waves on ecological and geomorphological structures on the Great Barrier Reef. Cont. Shelf Res. 12, 859–872. doi:10.1016/0278-4343(92)90048-O
41. Treml, E., Colgan, M., and Keevican, M. (1997). Hurricane Disturbance and Coral Reef Development: A geographic information system (GIS) analysis of 501 years of hurricane data from the Lesser Antilles. in Proceedings of the 8th International Coral Reef Symposium, 541–546
42. Mumby, P. J., Vitolo, R., and Stephenson, D. B. (2011). Temporal clustering of tropical cyclones and its ecosystem impacts. Proc. Natl. Acad. Sci. 108, 17626–17630. doi:10.1073/pnas.1100436108.
43. Wolff, N. H., Wong, A., Vitolo, R., Stolberg, K., Anthony, K. R. N., and Mumby, P. J. (2016). Temporal clustering of tropical cyclones on the Great Barrier Reef and its ecological importance. Coral Reefs 35, 613–623. doi:10.1007/s00338-016-1400-9.
44. Cote, I. M., Gill, J. A., Gardner, T. A., and Watkinson, A. R. (2005). Measuring coral reef decline through meta-analyses. Philos. Trans. R. Soc. B Biol. Sci. 360, 385–395. doi:10.1098/rstb.2004.1591.
45. Muggeo, Vito M.R. (2008). segmented: an R Package to Fit Regression Models with Broken-Line Relationships. R News, 8/1, 20-25. URL https://cran.r-project.org/doc/Rnews/.
46. Bates, D., Maechler, M., Bolker, B., and Walker, S. (2015). Fitting Linear Mixed-Effects Models Using lme4. J. Stat. Softw. 67. doi:10.18637/jss.v067.i01.
47. AGRRA. 2019. Atlantic and Gulf Rapid Reef Assessment (AGRRA): An online database of AGRRA coral reef survey data. Available: http://agrra.org. (Accessed: 2018-3-13)
48. Florida Fish and Wildlife Conservation Commission- Fish and Wildlife Research Institute and CREMP Team and Collaborators. Coral Reef Evaluation and Monitoring Project. Available: https://geodata.myfwc.com/datasets/60c6e6651a774b0aa40adbe8e5c68ae1_13/explore (Accessed: 2019-1-16)
49. Reef Check Foundation. Reef Check Global Reef Dataset. Available: data.reefcheck.org. (Accessed: 2018-3-21)
50. Edgar, GJ and Stuart-Smith, RD 2018., Reef Life Survey (RLS): Habitat Quadrats. Institute for Marine and Antarctic Studies (IMAS). Available at https://catalogue-rls.imas.utas.edu.au/geonetwork/srv/en/metadata.show?uuid=6e9c4980-1005-11dd-b28e-00188b4c0af8. (Accessed 2018-8-10)
51. California State University Northridge and P. Edmunds. 2019. Virgin Islands National Park: Coral Reef: Population Dynamics: Scleractinian corals ver 1. Environmental Data Initiative. https://doi.org/10.6073/pasta/8cd311eae47675f714717fe78c737634 (Accessed 2019-06-11).
52. Guest, J.R., Edmunds, P.J., Gates, R.D., Kuffner, I.B., Brown, E.K., Rodgers, K.S., Jokiel, P.L., Ruzicka, R.R., Colella, M.A., Miller, J., Atkinson, A., Feeley, M.W., Rogers, C.S., 2018, Time-series coral-cover data from Hawaii, Florida, Mo’orea, and the Virgin Islands: U.S. Geological Survey data release, https://doi.org/10.5066/F78W3C7W (Accessed: 2018-8-10)
53. TCRMP Benthic Cover and Coral Health datasets. Available at: https://sites.google.com/site/usvitcrmp/home (Accessed: 2019-9-25)
54. Linton, D., and Fisher, T. (2004). CARICOMP: Caribbean coastal marine productitity program: 1993-2003. , eds. D. Linton and T. Fisher Caribbean Coastal Marine Productivity (CARICOMP) Program.
55. Stokes, M. D., Leichter, J. J., and Genovese, S. J. (2010). Long-Term Declines in Coral Cover at Bonaire, Netherlands Antilles. Atoll Res. Bull. 582, 1–21.
56. Steneck, R. S., Arnold, S. N., Boenish, R., de León, R., Mumby, P. J., Rasher, D. B., et al. (2019). Managing recovery resilience in coral reefs against climate-induced bleaching and hurricanes: A 15 year case study from Bonaire, Dutch Caribbean. Front. Mar. Sci. 6, 1–12. doi:10.3389/fmars.2019.00265.
57. Toth, L. T., van Woesik, R., Murdoch, T. J. T., Smith, S. R., Ogden, J. C., Precht, W. F., et al. (2014). Do no-take reserves benefit Florida’s corals? 14 years of change and stasis in the Florida Keys National Marine Sanctuary. Coral Reefs 33, 565–577. doi:10.1007/s00338-014-1158-x.