SparseRNAFolD: Optimized Sparse RNA Pseudoknot-Free Folding with Dangle Consideration
Unifying Duplication Episode Clustering andGene-Species Mapping Inference
Fractional Hitting Sets for Efficient Multiset Sketching
PFP-FM: An Accelerated FM-index
Infrared: a declarative tree decomposition-powered framework for bioinformatics
Salt corrections for RNA secondary structures in the ViennaRNA package
On the Complexity of Non-Binary Tree Reconciliation with Endosymbiotic Gene Transfer
On Weighted k-mer Dictionaries
Relative Timing Information and Orthology inEvolutionary Scenarios
Eulertigs: minimum plain text representation of k-mer sets without repetitions in linear time
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